The detailed information of tRNA gene sequence


Sequence ID>WENV170644083
Genome IDJMBV01034366
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 235
End posion on genome 311
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aattgttcat
tRNA gene sequence 
GGGCGATTGGTTCAGTTGGTTAGAGCGCCACGTTGACATCGTGGAGATCGTTGGTTCGAG
TCCAATATCGCCCACCA
Downstream region at tRNA end position 
tataaagaga
Secondary structure (Cloverleaf model)
>WENV170644083	Val	GAC
                   t      ACCA tataaagaga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T A A C C     A
      T G A        G      + | | | |     G
    T       C T T G       G T T G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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