The detailed information of tRNA gene sequence


Sequence ID>WENV170644085
Genome IDJMBV01034644
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 345
End posion on genome 269
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnttgttcgg
tRNA gene sequence 
GGGGGCGTAGCTCAGTTTGGTAGAGCGCATGGTTTGGGACCATGATGTCGCAGGTTCAAA
TCCTGTCGCCCCCCCGA
Downstream region at tRNA end position 
ccattcgttg
Secondary structure (Cloverleaf model)
>WENV170644085	Pro	TGG
                   g      CCGA ccattcgttg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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