The detailed information of tRNA gene sequence


Sequence ID>WENV170644091
Genome IDJMBV01036096
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 6
End posion on genome 84
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnccctt
tRNA gene sequence 
GGATGCTTATAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCG
AATCCACCTAAGCCCACCA
Downstream region at tRNA end position 
tctatctaca
Secondary structure (Cloverleaf model)
>WENV170644091	Ile	GAT
                   t      ACCA tctatctaca
                     G - C
                     G - C
                     A   C
                     T + G
                     G   A
                     C   A
                     T   T          T A
                    T     C C A C C     A
    G A C T        A      | | | | |     G
  T         C G A T       G G T G G     C
  T         |                       T T
  G         G A G C
    G T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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