The detailed information of tRNA gene sequence


Sequence ID>WENV170644092
Genome IDJMBV01036398
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 312
End posion on genome 221
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cactgaatgG
tRNA gene sequence 
GAGGGGGTGTCCGAGCGGTTTATGGAGCCGGTCTTGAAAACCGGTGTCTCAGAGATGGGC
CGTGGGTTCGAATCCCACCCCCCCTCCGCCA
Downstream region at tRNA end position 
ttgctcgtag
Secondary structure (Cloverleaf model)
>WENV170644092	Ser	TGA
                   G      GCCA ttgctcgtag
                     G - C
                     A   C
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C          C C
                    T     C C C A C     T
      C G A        G      | | | |       A
    G       G C C T       G G G T T     A
    G       + | | |                 C G
    T       T G G A
      T T A        G     TGTCTCAGAGATGGGCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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