The detailed information of tRNA gene sequence


Sequence ID>WENV170644094
Genome IDJMBV01036630
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 241
End posion on genome 165
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctctatcttT
tRNA gene sequence 
GGGCTCGTAGATCAGGGGGGGTAGATCGTTTCGTTCGCAACGAAAAGGCCGCGGGTTCAA
ATCCCGCCGAGTCCATgt
Downstream region at tRNA end position 
tctgtttctc
Secondary structure (Cloverleaf model)
>WENV170644094	Ala	CGC
                   T      ATgt tctgtttctc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
    G G G A        A      | | | | |     A
  G         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    G T A          G     AGGCC
                    T - A
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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