The detailed information of tRNA gene sequence


Sequence ID>WENV170644096
Genome IDJMBV01037365
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 128
End posion on genome 205
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ataaatatgg
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGGGTCAGGAGTTCGA
ATCTCCTCATCTCCACCA
Downstream region at tRNA end position 
ttatgaccta
Secondary structure (Cloverleaf model)
>WENV170644096	Ala	TGC
                   g      ACCA ttatgaccta
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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