The detailed information of tRNA gene sequence


Sequence ID>WENV170644097
Genome IDJMBV01037520
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 129
End posion on genome 218
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgaaatagtg
tRNA gene sequence 
GGAGAGGTGACAGAGTGGCCGAATGTGGCGGTCTCGAAAACCGTTGGGCGTGTAAGCGTC
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gattcttctt
Secondary structure (Cloverleaf model)
>WENV170644097	Ser	CGA
                   g      GCCA gattcttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G A C A       G T G G G     C
    G         | | |                 T T
    C       A T G T
      C G A        G     TGGGCGTGTAAGCGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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