The detailed information of tRNA gene sequence


Sequence ID>WENV170644102
Genome IDJMBV01038882
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 216
End posion on genome 309
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaaagttag
tRNA gene sequence 
GGAGAGATGGCCGAGTTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAGACGGTGTTGAGC
TGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttgatatnnn
Secondary structure (Cloverleaf model)
>WENV170644102	Ser	GCT
                   g      GCCA ttgatatnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAGACGGTGTTGAGCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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