The detailed information of tRNA gene sequence


Sequence ID>WENV170644105
Genome IDJMBV01039151
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 170
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaaacacat
tRNA gene sequence 
CGCGGGATGGAGCAGTATGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCTCCCGCAACCA
Downstream region at tRNA end position 
taatttcagc
Secondary structure (Cloverleaf model)
>WENV170644105	Met	CAT
                   t      ACCA taatttcagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    A       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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