The detailed information of tRNA gene sequence


Sequence ID>WENV170644106
Genome IDJMBV01039206
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 235
End posion on genome 142
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatagcttgc
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAAGCGCTCGCCTCGAAAGCGAGTAGGCGGGGGGGAAC
CGCCTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttttgtcta
Secondary structure (Cloverleaf model)
>WENV170644106	Ser	CGA
                   c      GCCA tttttgtcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TAGGCGGGGGGGAACCGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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