The detailed information of tRNA gene sequence


Sequence ID>WENV170644111
Genome IDJMBV01039715
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 89
End posion on genome 13
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgaaaataa
tRNA gene sequence 
GGCCCGGTAGTTCAGATGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
tcctgtaatt
Secondary structure (Cloverleaf model)
>WENV170644111	Asp	GTC
                   a      GCCA tcctgtaatt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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