The detailed information of tRNA gene sequence


Sequence ID>WENV170644112
Genome IDJMBV01040550
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 25
End posion on genome 101
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttccataat
tRNA gene sequence 
GAGGGATTAGTTTAATGGTAAAACAACGGTCTCCAAAACCGTATTTAGGGGGGGTTCGAA
TCCTCTATTCCTTGCCA
Downstream region at tRNA end position 
aatgttctct
Secondary structure (Cloverleaf model)
>WENV170644112	Trp	CCA
                   t      GCCA aatgttctct
                     G + T
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T C T C C     A
        A A        A      + | + | |     G
      T     T T T G       G G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ATTTAGG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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