The detailed information of tRNA gene sequence


Sequence ID>WENV170644116
Genome IDJMBV01041840
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 36
End posion on genome 112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagtaaatga
tRNA gene sequence 
CGCGGGATGGAGCAGTATGGTAGCTCGTCGGGCTCATAACCCGGAGGTCATAGGTTCAAA
TCCTATTCCCGCAACCA
Downstream region at tRNA end position 
taattttctt
Secondary structure (Cloverleaf model)
>WENV170644116	Met	CAT
                   a      ACCA taattttctt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    A       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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