The detailed information of tRNA gene sequence


Sequence ID>WENV170644117
Genome IDJMBV01041840
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 180
End posion on genome 256
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacataatat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCTAGAGCATGCGGTTCATACCCGCAGTGTCAGCGGTTCAAA
TCCGTTCGCCGCTACCA
Downstream region at tRNA end position 
tattcaattt
Secondary structure (Cloverleaf model)
>WENV170644117	Met	CAT
                   t      ACCA tattcaattt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T G C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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