The detailed information of tRNA gene sequence


Sequence ID>WENV170644125
Genome IDJMBV01042971
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 265
End posion on genome 176
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgccacgggg
tRNA gene sequence 
GGAAGGGTGTCCGAGCGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCGTAAGAGCCG
TGGGTTCGAATCCCACCCCCCCTTCCGCC
Downstream region at tRNA end position 
Attactgcgc
Secondary structure (Cloverleaf model)
>WENV170644125	Ser	TGA
                   g      CGCC Attactgcgc
                     G - C
                     G + T
                     A - T
                     A   C
                     G - C
                     G - C
                     G - C          C C
                    T     C C C A C     T
      C G A        G      | | | |       A
    G       G C C T       G G G T T     A
    G         | | |                 C G
    T       A G G A
      T T A        G     TGACTCGTAAGAGCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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