The detailed information of tRNA gene sequence


Sequence ID>WENV170644126
Genome IDJMBV01042971
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 148
End posion on genome 55
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agctaaatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTAGGTCGAAGGCGGTCGCCTGCTAAGCGATTGTACAGCCTATAAC
TGTACCCCCGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
taaaaaaata
Secondary structure (Cloverleaf model)
>WENV170644126	Ser	GCT
                   c      GCCA taaaaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
    A T G A        G      | |   | |     G
  G         G C C G       C C C G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TGTACAGCCTATAACTGTACC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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