The detailed information of tRNA gene sequence


Sequence ID>WENV170644131
Genome IDJMBV01043842
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 116
End posion on genome 40
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttttgttggg
tRNA gene sequence 
GGGCTTGTAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
tttctgatat
Secondary structure (Cloverleaf model)
>WENV170644131	Ile	GAT
                   g      ACCA tttctgatat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C C A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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