The detailed information of tRNA gene sequence


Sequence ID>WENV170644133
Genome IDJMBV01044239
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 163
End posion on genome 241
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atatttgatg
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGGGGTCAGGAGTTCG
AATCTCCTCATCTCCACCA
Downstream region at tRNA end position 
ttataaaagc
Secondary structure (Cloverleaf model)
>WENV170644133	Ala	TGC
                   g      ACCA ttataaaagc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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