The detailed information of tRNA gene sequence


Sequence ID>WENV170644143
Genome IDJMBV01046404
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 218
End posion on genome 142
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agtgttgctt
tRNA gene sequence 
CGGGATGTAGCGCAGTTTGGTAGCGCGTCTGGTTCGGGACCAGAAGGCCGCAGGTTCAAA
TCCTGTCATCCCGACCA
Downstream region at tRNA end position 
ttttattttc
Secondary structure (Cloverleaf model)
>WENV170644143	Pro	CGG
                   t      ACCA ttttattttc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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