The detailed information of tRNA gene sequence


Sequence ID>WENV170644145
Genome IDJMBV01046825
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 106
End posion on genome 181
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gactaaaata
tRNA gene sequence 
TGGGGTGTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCGAAT
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
actgcacctt
Secondary structure (Cloverleaf model)
>WENV170644145	Ala	TGC
                   a      ACCA actgcacctt
                     T   C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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