The detailed information of tRNA gene sequence


Sequence ID>WENV170644146
Genome IDJMBV01047375
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 95
End posion on genome 20
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tacaggaatg
tRNA gene sequence 
GGGGCAATAGCTCAGCTGGAAGAGCACCTGCGTCACATGTAGGGGGTCACAGGTTCAAGT
CCTGTTTGCCCCCCCA
Downstream region at tRNA end position 
ccattcttta
Secondary structure (Cloverleaf model)
>WENV170644146	Val	CAC
                   g      CCCA ccattcttta
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T G
                    T     T G T C C     A
      C G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  G       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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