The detailed information of tRNA gene sequence


Sequence ID>WENV170644147
Genome IDJMBV01047519
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 166
End posion on genome 70
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tctttcacgc
tRNA gene sequence 
GGGAGTAGATTGGTCCTGGTGGGCCTCCTGGACTTCAAATCCAGTGGCGGGCAGCTAACC
TGGCCGCGGTGGGTTCGATTCCCACGTACTCCCGCCA
Downstream region at tRNA end position 
tttcatgccc
Secondary structure (Cloverleaf model)
>WENV170644147	SeC(p)	TCA
                   c      GCCA tttcatgccc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   G          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G T       G T G G G     C
    G       + | |                   T T
    T       G C C T
      G G          C     TGGCGGGCAGCTAACCTGGCCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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