The detailed information of tRNA gene sequence


Sequence ID>WENV170644148
Genome IDJMBV01047977
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 106
End posion on genome 13
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtttgttac
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCGAAGGCGGTCGCCTGCTAAGCGATTATACGGCTTAAAAC
CGTATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taaaataaag
Secondary structure (Cloverleaf model)
>WENV170644148	Ser	GCT
                   c      GCCA taaaataaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACGGCTTAAAACCGTATC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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