The detailed information of tRNA gene sequence


Sequence ID>WENV170644156
Genome IDJMBV01048790
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 57
End posion on genome 133
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaaatttaa
tRNA gene sequence 
GGCCCCGTAGTGTAGCGGTTTACCACGCCTGCCTGTCACGCAGGAGATCGCCGGTTCAAA
TCCGGTCGGGGTCGTCA
Downstream region at tRNA end position 
ttatgcgggt
Secondary structure (Cloverleaf model)
>WENV170644156	Asp	GTC
                   a      GTCA ttatgcgggt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      C G A        A      + | | | |     A
    G       T G T G       G C C G G     C
    G         | | |                 T T
    T       C C A C
      T T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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