The detailed information of tRNA gene sequence


Sequence ID>WENV170644157
Genome IDJMBV01048812
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 130
End posion on genome 206
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcactgaat
tRNA gene sequence 
GGGCTTGTAGCTCAGGCGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
aaaggttctt
Secondary structure (Cloverleaf model)
>WENV170644157	Ile	GAT
                   t      ACCA aaaggttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C C A C C     A
      G G A        A      | | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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