The detailed information of tRNA gene sequence


Sequence ID>WENV170644162
Genome IDJMBV01049279
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 205
End posion on genome 129
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnaaaat
tRNA gene sequence 
GGCCCGGTAGTTCAGATGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
tgctggtgta
Secondary structure (Cloverleaf model)
>WENV170644162	Asp	GTC
                   t      GCCA tgctggtgta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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