The detailed information of tRNA gene sequence


Sequence ID>WENV170644167
Genome IDJMBV01049731
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 196
End posion on genome 121
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnngcatata
tRNA gene sequence 
AGCCACATAGCTCAGCAGGTAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCAAGC
CCGGTTGTGGGCTCCA
Downstream region at tRNA end position 
ttttaattca
Secondary structure (Cloverleaf model)
>WENV170644167	Thr	GGT
                   a      TCCA ttttaattca
                     A   C
                     G   G
                     C - G
                     C - G
                     A - T
                     C - G
                     A - T          C G
                    T     T G G C C     A
      C G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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