The detailed information of tRNA gene sequence


Sequence ID>WENV170644172
Genome IDJMBW01000016
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1171
End posion on genome 1247
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atataggtat
tRNA gene sequence 
GCACCCTTAGCTCAGTTGGATAGAGTCGCTGACTTCGAATCAGTTGGTCGGGGGTTCGAG
TCCCTCAGGGTGCGCCA
Downstream region at tRNA end position 
ctaaaacctt
Secondary structure (Cloverleaf model)
>WENV170644172	Arg	TCG
                   t      GCCA ctaaaacctt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        C     TGGTC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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