The detailed information of tRNA gene sequence


Sequence ID>WENV170644188
Genome IDJMBW01000217
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 4610
End posion on genome 4698
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgcctgccc
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGAGAGGTAT
CAAGGGTTCGAATCCCTTCCTCTCCGCCT
Downstream region at tRNA end position 
tataatagtc
Secondary structure (Cloverleaf model)
>WENV170644188	Ser	GGA
                   c      GCCT tataatagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       A A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATACCGAGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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