The detailed information of tRNA gene sequence


Sequence ID>WENV170644189
Genome IDJMBW01000226
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 484
End posion on genome 574
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttatttat
tRNA gene sequence 
GGAGAGATGTCCGAGAGGTTGAAGGTGGTGGTCTCGAAAACCACTGTACAGGCATTCTGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttagatttta
Secondary structure (Cloverleaf model)
>WENV170644189	Ser	CGA
                   t      GCCA ttagatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      T G A        G     TGTACAGGCATTCTGTACC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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