The detailed information of tRNA gene sequence


Sequence ID>WENV170644197
Genome IDJMBW01000572
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3619
End posion on genome 3544
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaaagtaccT
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCACCGCTCTCCAAAAGCGGGGGGCTGAGGGTTCGAG
TCCTTCCTGACCTGTtg
Downstream region at tRNA end position 
atgttgattt
Secondary structure (Cloverleaf model)
>WENV170644197	Trp	CCA
                   T      GTtg atgttgattt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGGCT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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