The detailed information of tRNA gene sequence


Sequence ID>WENV170644207
Genome IDJMBW01000978
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1013
End posion on genome 937
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ataattgtgg
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGCTAGAGTGCCACGTTGACATCGTGGAGGTCGTTGGTTCGAG
CCCAATATCGCCCACCA
Downstream region at tRNA end position 
tagaaaaatc
Secondary structure (Cloverleaf model)
>WENV170644207	Val	GAC
                   g      ACCA tagaaaaatc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     T A A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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