The detailed information of tRNA gene sequence


Sequence ID>WENV170644224
Genome IDJMBW01001684
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1188
End posion on genome 1280
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcataatac
tRNA gene sequence 
GGAGAGATGTCTGAGTGGCTGAAAGTGGCGGTCTCGAAAACCGTTGCACAAGCGAACCTT
GTGCCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaaataaa
Secondary structure (Cloverleaf model)
>WENV170644224	Ser	CGA
                   c      GCCA aaaaaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T C T       G A G G G     C
    G         | |                   T T
    C       A A G T
      T G A        G     TGCACAAGCGAACCTTGTGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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