The detailed information of tRNA gene sequence


Sequence ID>WENV170644233
Genome IDJMBW01001938
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1134
End posion on genome 1209
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgattttcgg
tRNA gene sequence 
GGGGGCGTAGCGCAGATGGAAGCGCGTTGGTTTCGGGAACCAAAGGTCGCTGGTTCAAAT
CCAGTCGTCCCGACCA
Downstream region at tRNA end position 
tagattaaaa
Secondary structure (Cloverleaf model)
>WENV170644233	Pro	CGG
                   g      ACCA tagattaaaa
                     G   G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      A G A        A      + | | | |     A
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      A A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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