The detailed information of tRNA gene sequence


Sequence ID>WENV170644252
Genome IDJMBW01002711
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1957
End posion on genome 1874
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcacatttt
tRNA gene sequence 
CGGGATGTAGCTCAGTCCGGTTTAGAGTACGCGTCTGGGGGGGGCGTGGGGGGGTCGGAA
GTTCGAATCTTCTCATCCCGACAA
Downstream region at tRNA end position 
aaacagtcaa
Secondary structure (Cloverleaf model)
>WENV170644252	Pro	GGG
                   t      ACAA aaacagtcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T T C     A
    C T G A        A      + | | | |     G
  C         C T C G       G G A A G     C
  G         | | | +                 T T
  G         G A G T
    T T T A        A     TGGGGGGGTC
                    C - G
                    G - C
                    C - G
                    G   G
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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