The detailed information of tRNA gene sequence


Sequence ID>WENV170644257
Genome IDJMBW01003008
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1335
End posion on genome 1252
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tttttcctaa
tRNA gene sequence 
GCGGGAGTGGCGGAACTGGCAGACGCGCTAGACTTAGGATCTAGTGTCTTTGACGTGGGG
GTTCAAGTCCTCTCTCCCGCACCA
Downstream region at tRNA end position 
tttgaaccaa
Secondary structure (Cloverleaf model)
>WENV170644257	Leu	TAG
                   a      ACCA tttgaaccaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T C T C C     A
      C A A        G      + | + | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGTCTTTGACGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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