The detailed information of tRNA gene sequence


Sequence ID>WENV170644259
Genome IDJMBW01003141
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1037
End posion on genome 1125
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgcctgccc
tRNA gene sequence 
GCAGAGATCGCATAGTTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGAGAGGTAT
CAAGGGTTCGAATCCCTTTCTCTCCGCCT
Downstream region at tRNA end position 
tagattgata
Secondary structure (Cloverleaf model)
>WENV170644259	Ser	GGA
                   c      GCCT tagattgata
                     G - C
                     C   C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       A A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATACCGAGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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