The detailed information of tRNA gene sequence


Sequence ID>WENV170644262
Genome IDJMBW01003144
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1073
End posion on genome 1144
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcttttatta
tRNA gene sequence 
GGCGACGTGGCCAAGTGGTAAGGCAGGAGTCTGCAAAACTCTCATCATGGGTTCGATTCC
CATCGTCGCCTCtt
Downstream region at tRNA end position 
tttttgtgtc
Secondary structure (Cloverleaf model)
>WENV170644262	Cys	GCA
                   a      TCtt tttttgtgtc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T A C C C     A
        G A        G      | | | | |     G
      T     A C C G       A T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G + T
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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