The detailed information of tRNA gene sequence


Sequence ID>WENV170644264
Genome IDJMBW01003256
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 467
End posion on genome 376
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taataatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGACGAAGGCGCACGACTGGAAATCGTGTAAACGTGATAAGCG
TTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttgaaatttt
Secondary structure (Cloverleaf model)
>WENV170644264	Ser	GGA
                   t      GCCA ttgaaatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  A         A G G C
    C G A          G     TAAACGTGATAAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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