The detailed information of tRNA gene sequence


Sequence ID>WENV170644280
Genome IDJMBW01004467
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1347
End posion on genome 1271
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ctttaaaaaT
tRNA gene sequence 
GACTCCGTAGCTCAGTTGGTAGAGCAATTGACTCTTAATCAATGGGTCGAGGGTTCGAGC
CCCTCCGGGGGGGTCA
Downstream region at tRNA end position 
cttcattatc
Secondary structure (Cloverleaf model)
>WENV170644280	Lys	CTT
                   T      GTCA cttcattatc
                     G   G
                     A   G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          C G
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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