The detailed information of tRNA gene sequence


Sequence ID>WENV170644285
Genome IDJMBW01004701
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 561
End posion on genome 651
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taggtaattt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGATGAAGGCGCACGCCTGGAAAGCGTGTGTACGCCGAAAGCGT
ACCAAGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
attaattttt
Secondary structure (Cloverleaf model)
>WENV170644285	Ser	GGA
                   t      GCAA attaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    A       A G G C
      T G A        G     TGTACGCCGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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