The detailed information of tRNA gene sequence


Sequence ID>WENV170644291
Genome IDJMBW01004976
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1349
End posion on genome 1428
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttctttatt
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAATACGTGCCTGTCACGCACGGGGGGGTCGCGGGTTC
GAGTCCCGTCCGGACCGCCA
Downstream region at tRNA end position 
aaagagaccg
Secondary structure (Cloverleaf model)
>WENV170644291	Asp	GTC
                   t      GCCA aaagagaccg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGGGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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