The detailed information of tRNA gene sequence


Sequence ID>WENV170644299
Genome IDJMBW01005171
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 420
End posion on genome 511
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtttttat
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCTCCCCTGCTAAGGGAGTAGGTCCTTAATTAGG
GCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
catggggggg
Secondary structure (Cloverleaf model)
>WENV170644299	Ser	GCT
                   t      GCCA catggggggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCCTTAATTAGGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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