The detailed information of tRNA gene sequence


Sequence ID>WENV170644301
Genome IDJMBW01005171
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 781
End posion on genome 860
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaagttaggg
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCGGGGGGGTTC
GAGTCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
ctgataaagg
Secondary structure (Cloverleaf model)
>WENV170644301	Met	CAT
                   g      ACCA ctgataaagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A        + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCCGG
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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