The detailed information of tRNA gene sequence


Sequence ID>WENV170644305
Genome IDJMBW01005171
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1318
End posion on genome 1394
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aagttaaggg
tRNA gene sequence
GGGCCTTTAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position
actaaataaa
Secondary structure (Cloverleaf model)
>WENV170644305	Met	CAT
                   g      ACCA actaaataaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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