The detailed information of tRNA gene sequence


Sequence ID>WENV170644346
Genome IDJMBW01007067
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 880
End posion on genome 789
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataccaatca
tRNA gene sequence 
GGAAGGGTGCTTGAGTGGCCGAAAAGAGCCGCCTGCTAAGCGGTTGAGGGTTAACCGCCC
TCCGAGGGTTCAAATCCCTCCCCCTTCCGCC
Downstream region at tRNA end position 
Agatacgcgc
Secondary structure (Cloverleaf model)
>WENV170644346	Ser	GCT
                   a      CGCC Agatacgcgc
                     G - C
                     G + T
                     A - T
                     A   C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T T C       G A G G G     C
    G         | | |                 T T
    C       A A A G
      C G A        A     TGAGGGTTAACCGCCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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