The detailed information of tRNA gene sequence


Sequence ID>WENV170644360
Genome IDJMBW01007916
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 605
End posion on genome 682
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actttatggc
tRNA gene sequence 
GGGGGCGTGGCGCAGTTTGGCTAGCGCGCCTGCCTTGGGAGCAGGAGGCCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV170644360	Pro	TGG
                   c      ACCA ttttttttgc
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        G      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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