The detailed information of tRNA gene sequence


Sequence ID>WENV170644366
Genome IDJMBW01008045
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 123
End posion on genome 48
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaaagtaatc
tRNA gene sequence 
GGGCGTTTAGCTCAGCTGGTTCAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGA
ATCCGTCAACGCCCACtt
Downstream region at tRNA end position 
gaaaatcagg
Secondary structure (Cloverleaf model)
>WENV170644366	Val	TAC
                   c      ACtt gaaaatcagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T A
                    T     C T G C C     A
    T C G A        A      | + | | |     G
  G         C T C G       G G C G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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