The detailed information of tRNA gene sequence


Sequence ID>WENV170644368
Genome IDJMBW01008178
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 827
End posion on genome 924
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tactttgcat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACGAAGGCGCTCGCCTGGAAAGCGAGTAGATGGGGGGGCAAA
ACCTCGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170644368	Ser	GGA
                   t      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    A       A G G C
      C G A        G     TAGATGGGGGGGCAAAACCTCGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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