The detailed information of tRNA gene sequence


Sequence ID>WENV170644385
Genome IDJMBW01010221
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 323
End posion on genome 234
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcgttaaaa
tRNA gene sequence 
GGAGAGGTGACAGAGTGGCCGAATGTGGCGGTCTCGAAAACCGTTGGGCGTGCGAGCGCC
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatttttcta
Secondary structure (Cloverleaf model)
>WENV170644385	Ser	CGA
                   a      GCCA gatttttcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G A C A       G T G G G     C
    G         | | |                 T T
    C       A T G T
      C G A        G     TGGGCGTGCGAGCGCCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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